Carnation DB

Dca57470.1

Annotation

6-exons
f-1
sp|B9IM43_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1106887#unknown#0F0P0C
Os09t0428900-01 Similar to Conserved protein.
Repeat List (scaffold8266)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57470.1	5	198	214	64.95	194	69	6e-74
Target_name	Start	End	Length	Cov(%)
sp\|B9IM43_POPTR	4	204	399	50.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57470.1	13	198	214	57.94	186	66	4e-70
Target_name	Start	End	Length	Cov(%)
AT4G28020.1	15	202	351	53.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8266	Augustus	mRNA	9324	12244	.	+	.	ID=Dca57470.1;Parent=Dca57470
scaffold8266	Augustus	exon	9324	9393	.	+	.	ID=Dca57470.1.exon1;Parent=Dca57470.1
scaffold8266	Augustus	exon	9500	9624	.	+	.	ID=Dca57470.1.exon2;Parent=Dca57470.1
scaffold8266	Augustus	exon	10889	10992	.	+	.	ID=Dca57470.1.exon3;Parent=Dca57470.1
scaffold8266	Augustus	exon	11304	11499	.	+	.	ID=Dca57470.1.exon4;Parent=Dca57470.1
scaffold8266	Augustus	exon	11646	11742	.	+	.	ID=Dca57470.1.exon5;Parent=Dca57470.1
scaffold8266	Augustus	exon	12192	12244	.	+	.	ID=Dca57470.1.exon6;Parent=Dca57470.1