Dca57508.1
Annotation
- 3-exons
- f-1
- sp|A5CBM0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_001478#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold828)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57508.1 |
29 |
1082 |
1119 |
45.12 |
1054 |
42 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5CBM0_VITVI |
154 |
1348 |
1354 |
88.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57508.1 |
356 |
1079 |
1119 |
22.07 |
724 |
32 |
2e-109
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
603 |
1389 |
1401 |
56.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold828 |
Augustus |
mRNA |
63309 |
67196 |
. |
+ |
. |
ID=Dca57508.1;Parent=Dca57508 |
| scaffold828 |
Augustus |
exon |
63309 |
64360 |
. |
+ |
. |
ID=Dca57508.1.exon1;Parent=Dca57508.1 |
| scaffold828 |
Augustus |
exon |
64702 |
65704 |
. |
+ |
. |
ID=Dca57508.1.exon2;Parent=Dca57508.1 |
| scaffold828 |
Augustus |
exon |
65892 |
67196 |
. |
+ |
. |
ID=Dca57508.1.exon3;Parent=Dca57508.1 |
