Carnation DB

Dca57571.1

Annotation

8-exons
f-1
sp|F6H4H7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g00220#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
sp|C1KBJ2_VITVI#Transcription factor APETALA2#Vitis vinifera (Grape)#Name=AP2#GO:0005634;GO:0003677;GO:0003700;GO:0006351#2F1P1C
Repeat List (scaffold83)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57571.1	1	594	594	52.35	594	50	1e-131
Target_name	Start	End	Length	Cov(%)
sp\|F6H4H7_VITVI	1	507	507	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57571.1	111	426	594	33.5	316	60	2e-85
Target_name	Start	End	Length	Cov(%)
AT4G36920.1	61	328	432	62.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold83	Augustus	mRNA	240589	244425	.	+	.	ID=Dca57571.1;Parent=Dca57571
scaffold83	Augustus	exon	240589	241307	.	+	.	ID=Dca57571.1.exon1;Parent=Dca57571.1
scaffold83	Augustus	exon	242189	242276	.	+	.	ID=Dca57571.1.exon2;Parent=Dca57571.1
scaffold83	Augus-PASA	exon	242882	243027	.	+	.	ID=Dca57571.1.exon3;Parent=Dca57571.1
scaffold83	Augus-PASA	exon	243144	243188	.	+	.	ID=Dca57571.1.exon4;Parent=Dca57571.1
scaffold83	Augus-PASA	exon	243301	243392	.	+	.	ID=Dca57571.1.exon5;Parent=Dca57571.1
scaffold83	Augus-PASA	exon	243494	243702	.	+	.	ID=Dca57571.1.exon6;Parent=Dca57571.1
scaffold83	Augustus	exon	243844	244059	.	+	.	ID=Dca57571.1.exon7;Parent=Dca57571.1
scaffold83	Augustus	exon	244156	244425	.	+	.	ID=Dca57571.1.exon8;Parent=Dca57571.1