Carnation DB

Dca57684.1

Annotation

13-exons
f-1
sp|A5BAJ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010658#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family protein | chr1:11479921-11482707 FORWARD LENGTH=537
Repeat List (scaffold834)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57684.1	113	555	555	61.98	443	78	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BAJ6_VITVI	99	539	539	81.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57684.1	121	555	555	59.63	435	76	0
Target_name	Start	End	Length	Cov(%)
AT1G31970.1	100	536	537	81.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold834	Augus-PASA	mRNA	78315	83347	.	-	.	ID=Dca57684.1;Parent=Dca57684
scaffold834	Augus-PASA	exon	78315	78407	.	-	.	ID=Dca57684.1.exon1;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	78696	78788	.	-	.	ID=Dca57684.1.exon2;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	78899	79063	.	-	.	ID=Dca57684.1.exon3;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	79959	80052	.	-	.	ID=Dca57684.1.exon4;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	80143	80211	.	-	.	ID=Dca57684.1.exon5;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	80419	80486	.	-	.	ID=Dca57684.1.exon6;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	80577	80633	.	-	.	ID=Dca57684.1.exon7;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	80724	80809	.	-	.	ID=Dca57684.1.exon8;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	81059	81137	.	-	.	ID=Dca57684.1.exon9;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	81474	81554	.	-	.	ID=Dca57684.1.exon10;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	81883	81990	.	-	.	ID=Dca57684.1.exon11;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	82090	82214	.	-	.	ID=Dca57684.1.exon12;Parent=Dca57684.1
scaffold834	Augus-PASA	exon	82798	83347	.	-	.	ID=Dca57684.1.exon13;Parent=Dca57684.1