Dca5785.1
Annotation
- 2-exons
- f-1
- sp|O64724_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At2g02520#GO:0003964#1F0P0C
- Repeat List (scaffold1223)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5785.1 |
20 |
89 |
103 |
25.24 |
70 |
38 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O64724_ARATH |
39 |
108 |
211 |
33.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5785.1 |
20 |
89 |
103 |
25.24 |
70 |
38 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G02520.1 |
39 |
108 |
211 |
33.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1223 |
Augustus |
mRNA |
21846 |
22977 |
. |
- |
. |
ID=Dca5785.1;Parent=Dca5785 |
| scaffold1223 |
Augustus |
exon |
21846 |
21896 |
. |
- |
. |
ID=Dca5785.1.exon1;Parent=Dca5785.1 |
| scaffold1223 |
Augustus |
exon |
22717 |
22977 |
. |
- |
. |
ID=Dca5785.1.exon2;Parent=Dca5785.1 |
