Dca57882.1
Annotation
- 4-exons
- f-1
- sp|A5BLR9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012024#unknown#0F0P0C
- AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:388283-389743 FORWARD LENGTH=486
- Repeat List (scaffold84)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57882.1 |
87 |
538 |
547 |
50.45 |
452 |
61 |
6e-158
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BLR9_VITVI |
60 |
508 |
514 |
87.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57882.1 |
129 |
545 |
547 |
44.6 |
417 |
59 |
7e-135
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G01860.1 |
72 |
483 |
486 |
84.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold84 |
Augustus |
mRNA |
517269 |
522502 |
. |
+ |
. |
ID=Dca57882.1;Parent=Dca57882 |
| scaffold84 |
Augustus |
exon |
517269 |
517399 |
. |
+ |
. |
ID=Dca57882.1.exon1;Parent=Dca57882.1 |
| scaffold84 |
Augustus |
exon |
520107 |
520119 |
. |
+ |
. |
ID=Dca57882.1.exon2;Parent=Dca57882.1 |
| scaffold84 |
Augustus |
exon |
520867 |
520967 |
. |
+ |
. |
ID=Dca57882.1.exon3;Parent=Dca57882.1 |
| scaffold84 |
Augustus |
exon |
521104 |
522502 |
. |
+ |
. |
ID=Dca57882.1.exon4;Parent=Dca57882.1 |
