Carnation DB

Dca57893.1

Annotation

7-exons
f-1
sp|B9H9K4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_762094#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
sp|E6NU98_9ROSI#JHL06B08.10 protein#Jatropha curcas#Name=JHL06B08.10#GO:0005634;GO:0003677;GO:0046983;GO:0003700;GO:0006351#3F1P1C
Repeat List (scaffold840)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57893.1	1	234	241	43.56	234	42	2e-38
Target_name	Start	End	Length	Cov(%)
sp\|B9H9K4_POPTR	1	220	228	96.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca57893.1	1	216	241	39.41	216	40	1e-33
Target_name	Start	End	Length	Cov(%)
AT5G13790.1	1	216	268	80.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold840	Augustus	mRNA	3881	9132	.	-	.	ID=Dca57893.1;Parent=Dca57893
scaffold840	Augustus	exon	3881	3965	.	-	.	ID=Dca57893.1.exon1;Parent=Dca57893.1
scaffold840	Augustus	exon	4080	4201	.	-	.	ID=Dca57893.1.exon2;Parent=Dca57893.1
scaffold840	Augustus	exon	4832	4873	.	-	.	ID=Dca57893.1.exon3;Parent=Dca57893.1
scaffold840	Augustus	exon	5402	5501	.	-	.	ID=Dca57893.1.exon4;Parent=Dca57893.1
scaffold840	Augustus	exon	6396	6481	.	-	.	ID=Dca57893.1.exon5;Parent=Dca57893.1
scaffold840	Augustus	exon	8051	8159	.	-	.	ID=Dca57893.1.exon6;Parent=Dca57893.1
scaffold840	Augustus	exon	8951	9132	.	-	.	ID=Dca57893.1.exon7;Parent=Dca57893.1