Carnation DB

Dca58037.1

Annotation

11-exons
f-1
sp|B9HG65_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819875#unknown#0F0P0C
Os03t0851300-03 Winged helix repressor DNA-binding domain containing protein.
Repeat List (scaffold8459)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58037.1	4	440	440	85	437	86	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HG65_POPTR	6	442	442	98.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58037.1	2	439	440	80.9	438	82	0
Target_name	Start	End	Length	Cov(%)
Os03t0851300-03	5	442	444	98.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8459	Augustus	mRNA	24	4390	.	+	.	ID=Dca58037.1;Parent=Dca58037
scaffold8459	Augustus	exon	24	29	.	+	.	ID=Dca58037.1.exon1;Parent=Dca58037.1
scaffold8459	Augustus	exon	1026	1211	.	+	.	ID=Dca58037.1.exon2;Parent=Dca58037.1
scaffold8459	Augustus	exon	1741	1848	.	+	.	ID=Dca58037.1.exon3;Parent=Dca58037.1
scaffold8459	Augustus	exon	1941	2045	.	+	.	ID=Dca58037.1.exon4;Parent=Dca58037.1
scaffold8459	Augustus	exon	2172	2228	.	+	.	ID=Dca58037.1.exon5;Parent=Dca58037.1
scaffold8459	Augustus	exon	2315	2511	.	+	.	ID=Dca58037.1.exon6;Parent=Dca58037.1
scaffold8459	Augustus	exon	2661	2760	.	+	.	ID=Dca58037.1.exon7;Parent=Dca58037.1
scaffold8459	Augustus	exon	2842	2954	.	+	.	ID=Dca58037.1.exon8;Parent=Dca58037.1
scaffold8459	Augustus	exon	3064	3217	.	+	.	ID=Dca58037.1.exon9;Parent=Dca58037.1
scaffold8459	Augustus	exon	3310	3387	.	+	.	ID=Dca58037.1.exon10;Parent=Dca58037.1
scaffold8459	Augustus	exon	4172	4390	.	+	.	ID=Dca58037.1.exon11;Parent=Dca58037.1