Carnation DB

Dca5809.1

Annotation

7-exons
f-1
sp|B9S4C1_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0689290#GO:0003677#1F0P0C
Repeat List (scaffold1224)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5809.1	51	196	281	24.91	146	48	1e-30
Target_name	Start	End	Length	Cov(%)
sp\|B9S4C1_RICCO	27	170	209	68.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5809.1	51	198	281	22.06	148	42	4e-23
Target_name	Start	End	Length	Cov(%)
AT5G05330.1	59	205	220	66.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1224	Augustus	mRNA	70218	72895	.	+	.	ID=Dca5809.1;Parent=Dca5809
scaffold1224	Augustus	exon	70218	70534	.	+	.	ID=Dca5809.1.exon1;Parent=Dca5809.1
scaffold1224	Augustus	exon	71271	71358	.	+	.	ID=Dca5809.1.exon2;Parent=Dca5809.1
scaffold1224	Augustus	exon	71631	71717	.	+	.	ID=Dca5809.1.exon3;Parent=Dca5809.1
scaffold1224	Augustus	exon	71940	71987	.	+	.	ID=Dca5809.1.exon4;Parent=Dca5809.1
scaffold1224	Augustus	exon	72089	72144	.	+	.	ID=Dca5809.1.exon5;Parent=Dca5809.1
scaffold1224	Augustus	exon	72464	72625	.	+	.	ID=Dca5809.1.exon6;Parent=Dca5809.1
scaffold1224	Augustus	exon	72808	72895	.	+	.	ID=Dca5809.1.exon7;Parent=Dca5809.1