Carnation DB

Dca58158.1

Annotation

6-exons
f-1
sp|D7TEW7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0042g00800#GO:0000502;GO:0005488;GO:0030234;GO:0042176#2F1P1C
AT2G32730.1 | Symbols: | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004
Repeat List (scaffold8493)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58158.1	251	424	424	28.53	174	68	7e-49
Target_name	Start	End	Length	Cov(%)
sp\|D7TEW7_VITVI	827	1005	1005	17.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58158.1	251	424	424	27.35	174	64	1e-41
Target_name	Start	End	Length	Cov(%)
AT2G32730.1	823	1004	1004	18.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8493	Augustus	mRNA	4776	11833	.	-	.	ID=Dca58158.1;Parent=Dca58158
scaffold8493	Augustus	exon	4776	5096	.	-	.	ID=Dca58158.1.exon1;Parent=Dca58158.1
scaffold8493	Augustus	exon	5321	5524	.	-	.	ID=Dca58158.1.exon2;Parent=Dca58158.1
scaffold8493	Augustus	exon	8229	8567	.	-	.	ID=Dca58158.1.exon3;Parent=Dca58158.1
scaffold8493	Augustus	exon	9149	9317	.	-	.	ID=Dca58158.1.exon4;Parent=Dca58158.1
scaffold8493	Augustus	exon	9392	9503	.	-	.	ID=Dca58158.1.exon5;Parent=Dca58158.1
scaffold8493	Augustus	exon	11704	11833	.	-	.	ID=Dca58158.1.exon6;Parent=Dca58158.1