Dca58217.1
Annotation
- 4-exons
- f-994
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold850)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58217.1 |
115 |
193 |
296 |
13.17 |
79 |
49 |
3e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG0_BETVU |
222 |
300 |
428 |
18.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58217.1 |
26 |
359 |
361 |
27.14 |
334 |
30 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
217 |
540 |
857 |
37.8 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold850 |
Augustus |
mRNA |
66925 |
70052 |
. |
+ |
. |
ID=Dca58217.1;Parent=Dca58217 |
| scaffold850 |
Augustus |
exon |
66925 |
67188 |
. |
+ |
. |
ID=Dca58217.1.exon1;Parent=Dca58217.1 |
| scaffold850 |
Augustus |
exon |
67266 |
67332 |
. |
+ |
. |
ID=Dca58217.1.exon2;Parent=Dca58217.1 |
| scaffold850 |
Augustus |
exon |
67594 |
68151 |
. |
+ |
. |
ID=Dca58217.1.exon3;Parent=Dca58217.1 |
| scaffold850 |
Augustus |
exon |
68863 |
70052 |
. |
+ |
. |
ID=Dca58217.1.exon4;Parent=Dca58217.1 |
