Dca58378.1
Annotation
- 2-exons
- f-2
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold8563)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58378.1 |
1 |
184 |
200 |
64 |
184 |
70 |
7e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
859 |
1043 |
1313 |
14.08 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58378.1 |
1 |
168 |
200 |
37 |
168 |
45 |
1e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
980 |
1147 |
1428 |
11.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8563 |
Augustus |
mRNA |
1 |
6159 |
. |
+ |
. |
ID=Dca58378.1;Parent=Dca58378 |
| scaffold8563 |
Augustus |
exon |
1 |
500 |
. |
+ |
. |
ID=Dca58378.1.exon1;Parent=Dca58378.1 |
| scaffold8563 |
Augustus |
exon |
6056 |
6159 |
. |
+ |
. |
ID=Dca58378.1.exon2;Parent=Dca58378.1 |
