Carnation DB

Dca58471.1

Annotation

6-exons
f-1
sp|F4JY61_ARATH#CHY and CTCHY and RING-type zinc finger protein#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g25560#GO:0008270#1F0P0C
Repeat List (scaffold859)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58471.1	26	184	185	74.59	159	87	8e-83
Target_name	Start	End	Length	Cov(%)
sp\|F4JY61_ARATH	144	302	303	52.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58471.1	26	183	185	61.62	158	73	6e-68
Target_name	Start	End	Length	Cov(%)
Os01t0719100-04	147	302	303	51.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold859	Augustus	mRNA	98098	103619	.	-	.	ID=Dca58471.1;Parent=Dca58471
scaffold859	Augustus	exon	98098	98208	.	-	.	ID=Dca58471.1.exon1;Parent=Dca58471.1
scaffold859	Augustus	exon	98691	98802	.	-	.	ID=Dca58471.1.exon2;Parent=Dca58471.1
scaffold859	Augustus	exon	98894	98985	.	-	.	ID=Dca58471.1.exon3;Parent=Dca58471.1
scaffold859	Augustus	exon	99082	99205	.	-	.	ID=Dca58471.1.exon4;Parent=Dca58471.1
scaffold859	Augustus	exon	99364	99407	.	-	.	ID=Dca58471.1.exon5;Parent=Dca58471.1
scaffold859	Augustus	exon	103545	103619	.	-	.	ID=Dca58471.1.exon6;Parent=Dca58471.1