Dca58520.1
Annotation
- 4-exons
- f-1
- sp|A9P983_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_827930#unknown#0F0P0C
- sp|B9RLL0_RICCO#Protein COBRA, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1468840#unknown#0F0P0C
- Repeat List (scaffold86)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58520.1 |
11 |
216 |
223 |
56.5 |
206 |
62 |
1e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9P983_POPTR |
18 |
223 |
457 |
45.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58520.1 |
8 |
216 |
223 |
54.26 |
209 |
58 |
1e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G60920.1 |
15 |
223 |
456 |
45.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold86 |
Augustus |
mRNA |
188176 |
189534 |
. |
+ |
. |
ID=Dca58520.1;Parent=Dca58520 |
| scaffold86 |
Augustus |
exon |
188176 |
188257 |
. |
+ |
. |
ID=Dca58520.1.exon1;Parent=Dca58520.1 |
| scaffold86 |
Augustus |
exon |
188598 |
188677 |
. |
+ |
. |
ID=Dca58520.1.exon2;Parent=Dca58520.1 |
| scaffold86 |
Augustus |
exon |
188845 |
189301 |
. |
+ |
. |
ID=Dca58520.1.exon3;Parent=Dca58520.1 |
| scaffold86 |
Augustus |
exon |
189482 |
189534 |
. |
+ |
. |
ID=Dca58520.1.exon4;Parent=Dca58520.1 |
