Carnation DB

Dca58556.1

Annotation

5-exons
f-1
sp|D7L740_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478142#unknown#0F0P0C
AT3G08010.1 | Symbols: ATAB2 | RNA binding | chr3:2556046-2557426 FORWARD LENGTH=374
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58556.1	1	372	372	69.08	372	68	2e-145
Target_name	Start	End	Length	Cov(%)
sp\|D7L740_ARALL	1	374	374	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58556.1	1	372	372	68.54	372	68	2e-145
Target_name	Start	End	Length	Cov(%)
AT3G08010.1	1	374	374	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augustus	mRNA	488438	490011	.	-	.	ID=Dca58556.1;Parent=Dca58556
scaffold86	Augustus	exon	488438	488697	.	-	.	ID=Dca58556.1.exon1;Parent=Dca58556.1
scaffold86	Augustus	exon	488879	489019	.	-	.	ID=Dca58556.1.exon2;Parent=Dca58556.1
scaffold86	Augustus	exon	489097	489268	.	-	.	ID=Dca58556.1.exon3;Parent=Dca58556.1
scaffold86	Augustus	exon	489349	489418	.	-	.	ID=Dca58556.1.exon4;Parent=Dca58556.1
scaffold86	Augustus	exon	489536	490011	.	-	.	ID=Dca58556.1.exon5;Parent=Dca58556.1