Carnation DB

Dca58563.1

Annotation

6-exons
f-1
sp|G5DW61_SILLA#E3 ubiquitin-protein ligase makorin#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0016874;GO:0003676;GO:0008270#3F0P0C
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58563.1	5	362	363	66.39	358	68	6e-139
Target_name	Start	End	Length	Cov(%)
sp\|G5DW61_SILLA	2	350	350	99.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58563.1	6	362	363	62.25	357	62	1e-127
Target_name	Start	End	Length	Cov(%)
Os06t0318700-01	5	368	369	98.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augus-PASA	mRNA	523127	528367	.	+	.	ID=Dca58563.1;Parent=Dca58563
scaffold86	Augus-PASA	exon	523127	523143	.	+	.	ID=Dca58563.1.exon1;Parent=Dca58563.1
scaffold86	Augus-PASA	exon	523283	523370	.	+	.	ID=Dca58563.1.exon2;Parent=Dca58563.1
scaffold86	Augus-PASA	exon	523488	524278	.	+	.	ID=Dca58563.1.exon3;Parent=Dca58563.1
scaffold86	Augus-PASA	exon	526907	526976	.	+	.	ID=Dca58563.1.exon4;Parent=Dca58563.1
scaffold86	Augus-PASA	exon	527924	528012	.	+	.	ID=Dca58563.1.exon5;Parent=Dca58563.1
scaffold86	Augustus	exon	528331	528367	.	+	.	ID=Dca58563.1.exon6;Parent=Dca58563.1