Dca5878.1
Annotation
- 3-exons
- f-1
- sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1228)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5878.1 |
13 |
1305 |
1308 |
46.55 |
1293 |
45 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B919_VITVI |
17 |
1363 |
1450 |
92.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5878.1 |
315 |
1290 |
1308 |
24.77 |
976 |
33 |
5e-133
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1303 |
1401 |
66.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1228 |
Augustus |
mRNA |
17633 |
22081 |
. |
- |
. |
ID=Dca5878.1;Parent=Dca5878 |
| scaffold1228 |
Augustus |
exon |
17633 |
17685 |
. |
- |
. |
ID=Dca5878.1.exon1;Parent=Dca5878.1 |
| scaffold1228 |
Augustus |
exon |
17899 |
21409 |
. |
- |
. |
ID=Dca5878.1.exon2;Parent=Dca5878.1 |
| scaffold1228 |
Augustus |
exon |
21719 |
22081 |
. |
- |
. |
ID=Dca5878.1.exon3;Parent=Dca5878.1 |
