Carnation DB

Dca58814.1

Annotation

14-exons
f-1
sp|A9PHT0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_674445#unknown#0F0P0C
AT4G31340.1 | Symbols: | myosin heavy chain-related | chr4:15205662-15208950 FORWARD LENGTH=437
Repeat List (scaffold8685)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58814.1	5	451	451	58.53	447	59	2e-146
Target_name	Start	End	Length	Cov(%)
sp\|A9PHT0_POPTR	2	447	447	99.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58814.1	41	451	451	48.78	411	54	8e-126
Target_name	Start	End	Length	Cov(%)
AT4G31340.1	30	437	437	93.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8685	Augus-PASA	mRNA	15422	23397	.	+	.	ID=Dca58814.1;Parent=Dca58814
scaffold8685	Augus-PASA	exon	15422	15617	.	+	.	ID=Dca58814.1.exon1;Parent=Dca58814.1
scaffold8685	Augus-PASA	exon	17645	17772	.	+	.	ID=Dca58814.1.exon2;Parent=Dca58814.1
scaffold8685	Augus-PASA	exon	17918	17989	.	+	.	ID=Dca58814.1.exon3;Parent=Dca58814.1
scaffold8685	Augustus	exon	18079	18192	.	+	.	ID=Dca58814.1.exon4;Parent=Dca58814.1
scaffold8685	Augustus	exon	18518	18586	.	+	.	ID=Dca58814.1.exon5;Parent=Dca58814.1
scaffold8685	Augustus	exon	18680	18736	.	+	.	ID=Dca58814.1.exon6;Parent=Dca58814.1
scaffold8685	Augustus	exon	20366	20419	.	+	.	ID=Dca58814.1.exon7;Parent=Dca58814.1
scaffold8685	Augustus	exon	20504	20566	.	+	.	ID=Dca58814.1.exon8;Parent=Dca58814.1
scaffold8685	Augustus	exon	20912	20974	.	+	.	ID=Dca58814.1.exon9;Parent=Dca58814.1
scaffold8685	Augustus	exon	21673	21837	.	+	.	ID=Dca58814.1.exon10;Parent=Dca58814.1
scaffold8685	Augustus	exon	21937	22092	.	+	.	ID=Dca58814.1.exon11;Parent=Dca58814.1
scaffold8685	Augustus	exon	22934	23014	.	+	.	ID=Dca58814.1.exon12;Parent=Dca58814.1
scaffold8685	Augustus	exon	23098	23159	.	+	.	ID=Dca58814.1.exon13;Parent=Dca58814.1
scaffold8685	Augustus	exon	23322	23397	.	+	.	ID=Dca58814.1.exon14;Parent=Dca58814.1
scaffold8685	Augus-PASA	mRNA	15422	23397	.	+	.	ID=Dca58814.2;Parent=Dca58814
scaffold8685	Augus-PASA	exon	15422	15617	.	+	.	ID=Dca58814.2.exon1;Parent=Dca58814.2
scaffold8685	Augus-PASA	exon	17645	17772	.	+	.	ID=Dca58814.2.exon2;Parent=Dca58814.2
scaffold8685	Augustus	exon	18079	18192	.	+	.	ID=Dca58814.2.exon3;Parent=Dca58814.2
scaffold8685	Augustus	exon	18518	18586	.	+	.	ID=Dca58814.2.exon4;Parent=Dca58814.2
scaffold8685	Augustus	exon	18680	18736	.	+	.	ID=Dca58814.2.exon5;Parent=Dca58814.2
scaffold8685	Augustus	exon	20366	20419	.	+	.	ID=Dca58814.2.exon6;Parent=Dca58814.2
scaffold8685	Augustus	exon	20504	20566	.	+	.	ID=Dca58814.2.exon7;Parent=Dca58814.2
scaffold8685	Augustus	exon	20912	20974	.	+	.	ID=Dca58814.2.exon8;Parent=Dca58814.2
scaffold8685	Augustus	exon	21673	21837	.	+	.	ID=Dca58814.2.exon9;Parent=Dca58814.2
scaffold8685	Augustus	exon	21937	22092	.	+	.	ID=Dca58814.2.exon10;Parent=Dca58814.2
scaffold8685	Augustus	exon	22934	23014	.	+	.	ID=Dca58814.2.exon11;Parent=Dca58814.2
scaffold8685	Augustus	exon	23098	23159	.	+	.	ID=Dca58814.2.exon12;Parent=Dca58814.2
scaffold8685	Augustus	exon	23322	23397	.	+	.	ID=Dca58814.2.exon13;Parent=Dca58814.2