Carnation DB

Dca58887.1

Annotation

5-exons
f-1
sp|B9GFH6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1069320#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
AT3G26790.1 | Symbols: FUS3 | AP2/B3-like transcriptional factor family protein | chr3:9854025-9855748 REVERSE LENGTH=313
Repeat List (scaffold87)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58887.1	32	276	276	55.43	245	56	2e-69
Target_name	Start	End	Length	Cov(%)
sp\|B9GFH6_POPTR	5	259	259	98.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58887.1	35	276	276	50.72	242	49	5e-54
Target_name	Start	End	Length	Cov(%)
AT3G26790.1	45	313	313	85.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold87	Augustus	mRNA	336580	343022	.	-	.	ID=Dca58887.1;Parent=Dca58887
scaffold87	Augustus	exon	336580	336929	.	-	.	ID=Dca58887.1.exon1;Parent=Dca58887.1
scaffold87	Augustus	exon	337155	337201	.	-	.	ID=Dca58887.1.exon2;Parent=Dca58887.1
scaffold87	Augustus	exon	337288	337388	.	-	.	ID=Dca58887.1.exon3;Parent=Dca58887.1
scaffold87	Augustus	exon	337537	337626	.	-	.	ID=Dca58887.1.exon4;Parent=Dca58887.1
scaffold87	Augustus	exon	342780	343022	.	-	.	ID=Dca58887.1.exon5;Parent=Dca58887.1