Carnation DB

Dca5889.1

Annotation

6-exons
f-1
sp|D7SKV3_VITVI#Proteasome subunit beta type#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03190#GO:0005737;GO:0005634;GO:0005839;GO:0004298;GO:0051603#1F1P3C
Repeat List (scaffold12287)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5889.1	4	241	241	83.81	238	85	1e-117
Target_name	Start	End	Length	Cov(%)
sp\|D7SKV3_VITVI	9	245	245	96.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5889.1	13	241	241	74.68	229	79	1e-108
Target_name	Start	End	Length	Cov(%)
AT1G56450.1	19	246	246	92.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12287	Augustus	mRNA	236	3006	.	-	.	ID=Dca5889.1;Parent=Dca5889
scaffold12287	Augustus	exon	236	352	.	-	.	ID=Dca5889.1.exon1;Parent=Dca5889.1
scaffold12287	Augustus	exon	486	671	.	-	.	ID=Dca5889.1.exon2;Parent=Dca5889.1
scaffold12287	Augustus	exon	765	924	.	-	.	ID=Dca5889.1.exon3;Parent=Dca5889.1
scaffold12287	Augustus	exon	1067	1196	.	-	.	ID=Dca5889.1.exon4;Parent=Dca5889.1
scaffold12287	Augustus	exon	1741	1817	.	-	.	ID=Dca5889.1.exon5;Parent=Dca5889.1
scaffold12287	Augustus	exon	2951	3006	.	-	.	ID=Dca5889.1.exon6;Parent=Dca5889.1