Dca58954.1
Annotation
- 3-exons
- f-1
- sp|B9IJH8_POPTR#Ubiquitin carboxyl-terminal hydrolase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_778299#GO:0008234;GO:0004221;GO:0008270;GO:0006511#3F1P0C
- Repeat List (scaffold8723)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58954.1 |
1 |
835 |
837 |
45.51 |
835 |
41 |
1e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IJH8_POPTR |
1 |
908 |
910 |
99.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58954.1 |
550 |
835 |
837 |
16.36 |
286 |
43 |
5e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G04860.1 |
638 |
957 |
961 |
33.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8723 |
Augustus |
mRNA |
6529 |
9243 |
. |
- |
. |
ID=Dca58954.1;Parent=Dca58954 |
| scaffold8723 |
Augustus |
exon |
6529 |
6781 |
. |
- |
. |
ID=Dca58954.1.exon1;Parent=Dca58954.1 |
| scaffold8723 |
Augustus |
exon |
6882 |
7153 |
. |
- |
. |
ID=Dca58954.1.exon2;Parent=Dca58954.1 |
| scaffold8723 |
Augustus |
exon |
7255 |
9243 |
. |
- |
. |
ID=Dca58954.1.exon3;Parent=Dca58954.1 |
