Carnation DB

Dca59009.1

Annotation

6-exons
f-1
sp|A9PJ87_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0005634;GO:0003676;GO:0008270#2F0P1C
sp|B9S791_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0774560#GO:0005634;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold8746)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59009.1	48	292	294	52.38	245	62	7e-81
Target_name	Start	End	Length	Cov(%)
sp\|A9PJ87_9ROSI	1	248	250	99.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59009.1	48	292	294	49.65	245	58	2e-77
Target_name	Start	End	Length	Cov(%)
Os06t0215200-01	1	240	244	98.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8746	Augustus	mRNA	4896	9538	.	+	.	ID=Dca59009.1;Parent=Dca59009
scaffold8746	Augustus	exon	4896	4970	.	+	.	ID=Dca59009.1.exon1;Parent=Dca59009.1
scaffold8746	Augustus	exon	5707	5781	.	+	.	ID=Dca59009.1.exon2;Parent=Dca59009.1
scaffold8746	Augus-PASA	exon	5931	6131	.	+	.	ID=Dca59009.1.exon3;Parent=Dca59009.1
scaffold8746	Augus-PASA	exon	6249	6339	.	+	.	ID=Dca59009.1.exon4;Parent=Dca59009.1
scaffold8746	Augustus	exon	8974	9069	.	+	.	ID=Dca59009.1.exon5;Parent=Dca59009.1
scaffold8746	Augustus	exon	9192	9538	.	+	.	ID=Dca59009.1.exon6;Parent=Dca59009.1