Carnation DB

Dca59127.1

Annotation

7-exons
f-1
sp|B9H2P0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817835#GO:0016020;GO:0048193#0F1P1C
AT1G28490.1 | Symbols: SYP61, ATSYP61, OSM1 | syntaxin of plants 61 | chr1:10016433-10017842 FORWARD LENGTH=245
Repeat List (scaffold879)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59127.1	47	287	288	59.37	241	70	7e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9H2P0_POPTR	1	245	246	99.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59127.1	47	287	288	53.47	241	63	7e-80
Target_name	Start	End	Length	Cov(%)
AT1G28490.1	1	244	245	99.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold879	Augustus	mRNA	76606	82119	.	-	.	ID=Dca59127.1;Parent=Dca59127
scaffold879	Augustus	exon	76606	76716	.	-	.	ID=Dca59127.1.exon1;Parent=Dca59127.1
scaffold879	Augustus	exon	76932	76997	.	-	.	ID=Dca59127.1.exon2;Parent=Dca59127.1
scaffold879	Augustus	exon	77154	77244	.	-	.	ID=Dca59127.1.exon3;Parent=Dca59127.1
scaffold879	Augustus	exon	78351	78529	.	-	.	ID=Dca59127.1.exon4;Parent=Dca59127.1
scaffold879	Augustus	exon	79695	79808	.	-	.	ID=Dca59127.1.exon5;Parent=Dca59127.1
scaffold879	Augustus	exon	80620	80733	.	-	.	ID=Dca59127.1.exon6;Parent=Dca59127.1
scaffold879	Augustus	exon	81928	82119	.	-	.	ID=Dca59127.1.exon7;Parent=Dca59127.1