Dca59135.1
Annotation
- 4-exons
- f-388
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold8792)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59135.1 |
1 |
79 |
79 |
64.55 |
79 |
65 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2KWP6_ORYSJ |
281 |
359 |
932 |
8.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59135.1 |
1 |
72 |
79 |
46.83 |
72 |
47 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
668 |
746 |
1428 |
5.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8792 |
Augustus |
mRNA |
7835 |
9936 |
. |
- |
. |
ID=Dca59135.1;Parent=Dca59135 |
| scaffold8792 |
Augustus |
exon |
7835 |
8125 |
. |
- |
. |
ID=Dca59135.1.exon1;Parent=Dca59135.1 |
| scaffold8792 |
Augustus |
exon |
8396 |
8499 |
. |
- |
. |
ID=Dca59135.1.exon2;Parent=Dca59135.1 |
| scaffold8792 |
Augustus |
exon |
9159 |
9482 |
. |
- |
. |
ID=Dca59135.1.exon3;Parent=Dca59135.1 |
| scaffold8792 |
Augustus |
exon |
9699 |
9936 |
. |
- |
. |
ID=Dca59135.1.exon4;Parent=Dca59135.1 |
