Carnation DB

Dca5924.1

Annotation

5-exons
f-1
sp|B9RAC5_RICCO#Metal ion binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1505530#GO:0046872;GO:0030001#1F1P0C
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5924.1	35	345	345	54.78	311	59	1e-78
Target_name	Start	End	Length	Cov(%)
sp\|B9RAC5_RICCO	44	349	349	87.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5924.1	36	345	345	51.3	310	53	5e-59
Target_name	Start	End	Length	Cov(%)
AT5G63530.1	37	355	355	89.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augus-PASA	mRNA	177628	181361	.	+	.	ID=Dca5924.1;Parent=Dca5924
scaffold123	Augus-PASA	exon	177628	177636	.	+	.	ID=Dca5924.1.exon1;Parent=Dca5924.1
scaffold123	Augus-PASA	exon	177820	178093	.	+	.	ID=Dca5924.1.exon2;Parent=Dca5924.1
scaffold123	Augus-PASA	exon	178320	178525	.	+	.	ID=Dca5924.1.exon3;Parent=Dca5924.1
scaffold123	Augus-PASA	exon	179089	179176	.	+	.	ID=Dca5924.1.exon4;Parent=Dca5924.1
scaffold123	Augus-PASA	exon	180901	181361	.	+	.	ID=Dca5924.1.exon5;Parent=Dca5924.1