Carnation DB

Dca5926.1

Annotation

5-exons
f-1
sp|A2TF12_BRANA#Short-chain dehydrogenase reductase#Brassica napus (Rape)#Name=Slo-A#GO:0000166;GO:0016491#2F0P0C
Repeat List (scaffold123)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5926.1	13	302	303	53.46	290	56	1e-94
Target_name	Start	End	Length	Cov(%)
sp\|A2TF12_BRANA	60	348	349	82.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5926.1	13	302	303	53.79	290	57	2e-95
Target_name	Start	End	Length	Cov(%)
AT5G50700.1	60	348	349	82.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold123	Augustus	mRNA	197446	198718	.	+	.	ID=Dca5926.1;Parent=Dca5926
scaffold123	Augustus	exon	197446	197680	.	+	.	ID=Dca5926.1.exon1;Parent=Dca5926.1
scaffold123	Augustus	exon	197779	197864	.	+	.	ID=Dca5926.1.exon2;Parent=Dca5926.1
scaffold123	Augustus	exon	197949	198080	.	+	.	ID=Dca5926.1.exon3;Parent=Dca5926.1
scaffold123	Augustus	exon	198178	198342	.	+	.	ID=Dca5926.1.exon4;Parent=Dca5926.1
scaffold123	Augustus	exon	198425	198718	.	+	.	ID=Dca5926.1.exon5;Parent=Dca5926.1