Carnation DB

Dca593.1

Annotation

7-exons
f-1
sp|D7MPB9_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_495017#GO:0005634;GO:0003684;GO:0006289#1F1P1C
AT5G49570.1 | Symbols: AtPNG1, PNG1 | peptide-N-glycanase 1 | chr5:20112071-20116125 REVERSE LENGTH=721
Repeat List (scaffold1012)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca593.1	1	199	305	41.63	199	64	1e-66
Target_name	Start	End	Length	Cov(%)
sp\|D7MPB9_ARALL	1	185	721	25.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca593.1	1	199	305	40.98	199	63	1e-67
Target_name	Start	End	Length	Cov(%)
AT5G49570.1	1	185	721	25.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1012	Augustus	mRNA	39374	42961	.	-	.	ID=Dca593.1;Parent=Dca593
scaffold1012	Augustus	exon	39374	39692	.	-	.	ID=Dca593.1.exon1;Parent=Dca593.1
scaffold1012	Augustus	exon	40235	40317	.	-	.	ID=Dca593.1.exon2;Parent=Dca593.1
scaffold1012	Augustus	exon	41121	41210	.	-	.	ID=Dca593.1.exon3;Parent=Dca593.1
scaffold1012	Augus-PASA	exon	41296	41394	.	-	.	ID=Dca593.1.exon4;Parent=Dca593.1
scaffold1012	Augus-PASA	exon	42441	42635	.	-	.	ID=Dca593.1.exon5;Parent=Dca593.1
scaffold1012	Augus-PASA	exon	42719	42772	.	-	.	ID=Dca593.1.exon6;Parent=Dca593.1
scaffold1012	Augus-PASA	exon	42884	42961	.	-	.	ID=Dca593.1.exon7;Parent=Dca593.1