Dca59346.1
Annotation
- 4-exons
- f-1
- sp|B9IP24_POPTR#Calcium dependent protein kinase 12#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CPK12#GO:0005524;GO:0005509;GO:0004674#3F0P0C
- Repeat List (scaffold885)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59346.1 |
212 |
274 |
280 |
18.92 |
63 |
85 |
2e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IP24_POPTR |
264 |
326 |
503 |
12.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59346.1 |
212 |
274 |
280 |
18.21 |
63 |
81 |
1e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0171500-01 |
277 |
339 |
514 |
12.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold885 |
Augustus |
mRNA |
60412 |
64872 |
. |
+ |
. |
ID=Dca59346.1;Parent=Dca59346 |
| scaffold885 |
Augustus |
exon |
60412 |
61046 |
. |
+ |
. |
ID=Dca59346.1.exon1;Parent=Dca59346.1 |
| scaffold885 |
Augustus |
exon |
64485 |
64555 |
. |
+ |
. |
ID=Dca59346.1.exon2;Parent=Dca59346.1 |
| scaffold885 |
Augustus |
exon |
64647 |
64762 |
. |
+ |
. |
ID=Dca59346.1.exon3;Parent=Dca59346.1 |
| scaffold885 |
Augustus |
exon |
64852 |
64872 |
. |
+ |
. |
ID=Dca59346.1.exon4;Parent=Dca59346.1 |
