Carnation DB

Dca5937.1

Annotation

5-exons
f-1
sp|Q9ZVW0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g07010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5937.1	98	407	421	36.81	310	49	2e-80
Target_name	Start	End	Length	Cov(%)
sp\|Q9ZVW0_ARATH	976	1280	1413	21.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5937.1	247	413	421	13.77	167	35	9e-22
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	305	471	1262	13.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1230	Augustus	mRNA	8218	12155	.	+	.	ID=Dca5937.1;Parent=Dca5937
scaffold1230	Augustus	exon	8218	8238	.	+	.	ID=Dca5937.1.exon1;Parent=Dca5937.1
scaffold1230	Augustus	exon	8549	8816	.	+	.	ID=Dca5937.1.exon2;Parent=Dca5937.1
scaffold1230	Augustus	exon	10832	11401	.	+	.	ID=Dca5937.1.exon3;Parent=Dca5937.1
scaffold1230	Augustus	exon	11619	11962	.	+	.	ID=Dca5937.1.exon4;Parent=Dca5937.1
scaffold1230	Augustus	exon	12093	12155	.	+	.	ID=Dca5937.1.exon5;Parent=Dca5937.1