Carnation DB

Dca5955.1

Annotation

6-exons
f-1
sp|D7SQ61_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g01390#GO:0030170;GO:0008483#2F0P0C
AT5G57590.1 | Symbols: BIO1 | adenosylmethionine-8-amino-7-oxononanoate transaminases | chr5:23318593-23322687 REVERSE LENGTH=833
Repeat List (scaffold12306)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5955.1	47	275	285	57.54	229	72	2e-98
Target_name	Start	End	Length	Cov(%)
sp\|D7SQ61_VITVI	635	863	863	26.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5955.1	47	275	285	53.68	229	67	2e-93
Target_name	Start	End	Length	Cov(%)
AT5G57590.1	605	833	833	27.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12306	Augustus	mRNA	12297	16540	.	-	.	ID=Dca5955.1;Parent=Dca5955
scaffold12306	Augustus	exon	12297	12501	.	-	.	ID=Dca5955.1.exon1;Parent=Dca5955.1
scaffold12306	Augustus	exon	12960	13072	.	-	.	ID=Dca5955.1.exon2;Parent=Dca5955.1
scaffold12306	Augustus	exon	13441	13575	.	-	.	ID=Dca5955.1.exon3;Parent=Dca5955.1
scaffold12306	Augustus	exon	13950	14081	.	-	.	ID=Dca5955.1.exon4;Parent=Dca5955.1
scaffold12306	Augustus	exon	14165	14353	.	-	.	ID=Dca5955.1.exon5;Parent=Dca5955.1
scaffold12306	Augustus	exon	16457	16540	.	-	.	ID=Dca5955.1.exon6;Parent=Dca5955.1