Carnation DB

Dca5964.1

Annotation

7-exons
f-1
sp|A5BFR9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012107#GO:0003676;GO:0015074#1F1P0C
sp|Q7XV68_ORYSJ#OSJNBb0076A22.18 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0076A22.18#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold1231)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5964.1	210	578	1165	16.56	369	51	8e-109
Target_name	Start	End	Length	Cov(%)
sp\|A5BFR9_VITVI	185	562	1077	35.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5964.1	592	786	1165	6.09	195	36	4e-28
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	592	783	1401	13.7

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1231	Augustus	mRNA	21860	26788	.	+	.	ID=Dca5964.1;Parent=Dca5964
scaffold1231	Augustus	exon	21860	21893	.	+	.	ID=Dca5964.1.exon1;Parent=Dca5964.1
scaffold1231	Augustus	exon	21995	22240	.	+	.	ID=Dca5964.1.exon2;Parent=Dca5964.1
scaffold1231	Augustus	exon	22330	22572	.	+	.	ID=Dca5964.1.exon3;Parent=Dca5964.1
scaffold1231	Augustus	exon	23156	24132	.	+	.	ID=Dca5964.1.exon4;Parent=Dca5964.1
scaffold1231	Augustus	exon	24199	24442	.	+	.	ID=Dca5964.1.exon5;Parent=Dca5964.1
scaffold1231	Augustus	exon	24531	25360	.	+	.	ID=Dca5964.1.exon6;Parent=Dca5964.1
scaffold1231	Augustus	exon	25865	26788	.	+	.	ID=Dca5964.1.exon7;Parent=Dca5964.1