Dca59695.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold8971)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59695.1 |
243 |
312 |
316 |
11.39 |
70 |
52 |
9e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
893 |
962 |
964 |
7.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59695.1 |
32 |
241 |
316 |
28.16 |
210 |
41 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
469 |
686 |
1428 |
15.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8971 |
Augustus |
mRNA |
84 |
3214 |
. |
+ |
. |
ID=Dca59695.1;Parent=Dca59695 |
| scaffold8971 |
Augustus |
exon |
84 |
808 |
. |
+ |
. |
ID=Dca59695.1.exon1;Parent=Dca59695.1 |
| scaffold8971 |
Augustus |
exon |
2989 |
3214 |
. |
+ |
. |
ID=Dca59695.1.exon2;Parent=Dca59695.1 |
