Dca59725.1
Annotation
- 4-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- ATMG00820.1 | Symbols: ORF170 | Reverse transcriptase (RNA-dependent DNA polymerase) | chrM:228573-229085 REVERSE LENGTH=170
- Repeat List (scaffold8980)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59725.1 |
560 |
608 |
806 |
2.97 |
49 |
49 |
1e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
59 |
1717 |
2.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca59725.1 |
671 |
798 |
806 |
7.69 |
128 |
49 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00820.1 |
1 |
121 |
170 |
71.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold8980 |
Augustus |
mRNA |
61 |
7561 |
. |
+ |
. |
ID=Dca59725.1;Parent=Dca59725 |
| scaffold8980 |
Augustus |
exon |
61 |
1057 |
. |
+ |
. |
ID=Dca59725.1.exon1;Parent=Dca59725.1 |
| scaffold8980 |
Augustus |
exon |
1147 |
1630 |
. |
+ |
. |
ID=Dca59725.1.exon2;Parent=Dca59725.1 |
| scaffold8980 |
Augustus |
exon |
5819 |
6165 |
. |
+ |
. |
ID=Dca59725.1.exon3;Parent=Dca59725.1 |
| scaffold8980 |
Augustus |
exon |
6967 |
7561 |
. |
+ |
. |
ID=Dca59725.1.exon4;Parent=Dca59725.1 |
