Carnation DB

Dca59847.1

Annotation

5-exons
f-1
sp|A5AK34_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_003578#unknown#0F0P0C
Repeat List (scaffold9)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59847.1	5	134	187	38.5	130	55	1e-30
Target_name	Start	End	Length	Cov(%)
sp\|A5AK34_VITVI	22	152	228	57.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59847.1	1	127	187	34.22	127	50	3e-25
Target_name	Start	End	Length	Cov(%)
Os01t0617800-01	1	122	183	66.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9	Augus-PASA	mRNA	622797	624106	.	-	.	ID=Dca59847.1;Parent=Dca59847
scaffold9	Augus-PASA	exon	622797	623051	.	-	.	ID=Dca59847.1.exon1;Parent=Dca59847.1
scaffold9	Augus-PASA	exon	623147	623209	.	-	.	ID=Dca59847.1.exon2;Parent=Dca59847.1
scaffold9	Augus-PASA	exon	623301	623371	.	-	.	ID=Dca59847.1.exon3;Parent=Dca59847.1
scaffold9	Augus-PASA	exon	623851	623952	.	-	.	ID=Dca59847.1.exon4;Parent=Dca59847.1
scaffold9	Augus-PASA	exon	624034	624106	.	-	.	ID=Dca59847.1.exon5;Parent=Dca59847.1