Carnation DB

Dca59907.1

Annotation

5-exons
f-1
sp|A9PIM0_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0009654;GO:0042651;GO:0015979#0F1P2C
AT1G79040.1 | Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140
Repeat List (scaffold900)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59907.1	1	140	141	78.72	140	80	9e-55
Target_name	Start	End	Length	Cov(%)
sp\|A9PIM0_9ROSI	1	136	137	99.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca59907.1	1	141	141	71.63	141	72	4e-50
Target_name	Start	End	Length	Cov(%)
AT1G79040.1	1	140	140	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold900	Augus-PASA	mRNA	91667	92972	.	-	.	ID=Dca59907.1;Parent=Dca59907
scaffold900	Augus-PASA	exon	91667	91761	.	-	.	ID=Dca59907.1.exon1;Parent=Dca59907.1
scaffold900	Augus-PASA	exon	91860	91912	.	-	.	ID=Dca59907.1.exon2;Parent=Dca59907.1
scaffold900	Augus-PASA	exon	92339	92394	.	-	.	ID=Dca59907.1.exon3;Parent=Dca59907.1
scaffold900	Augus-PASA	exon	92506	92564	.	-	.	ID=Dca59907.1.exon4;Parent=Dca59907.1
scaffold900	Augus-PASA	exon	92810	92972	.	-	.	ID=Dca59907.1.exon5;Parent=Dca59907.1