Dca60223.1
Annotation
- 4-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold912)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60223.1 |
701 |
900 |
900 |
15.55 |
200 |
69 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
801 |
1003 |
1333 |
15.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60223.1 |
715 |
900 |
900 |
12.66 |
186 |
62 |
3e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
888 |
1073 |
1401 |
13.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold912 |
Augustus |
mRNA |
39476 |
42580 |
. |
+ |
. |
ID=Dca60223.1;Parent=Dca60223 |
| scaffold912 |
Augustus |
exon |
39476 |
41258 |
. |
+ |
. |
ID=Dca60223.1.exon1;Parent=Dca60223.1 |
| scaffold912 |
Augustus |
exon |
41332 |
41580 |
. |
+ |
. |
ID=Dca60223.1.exon2;Parent=Dca60223.1 |
| scaffold912 |
Augustus |
exon |
41758 |
41868 |
. |
+ |
. |
ID=Dca60223.1.exon3;Parent=Dca60223.1 |
| scaffold912 |
Augustus |
exon |
42021 |
42580 |
. |
+ |
. |
ID=Dca60223.1.exon4;Parent=Dca60223.1 |
