Dca60230.1
Annotation
- 3-exons
- f-1
- sp|Q9FWG3_ORYSJ#Putative gag/pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0015I11.24#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold9123)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60230.1 |
123 |
635 |
635 |
48.18 |
513 |
60 |
1e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FWG3_ORYSJ |
863 |
1377 |
1417 |
36.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60230.1 |
169 |
585 |
635 |
30.07 |
417 |
42 |
1e-107
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
98 |
554 |
1262 |
36.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9123 |
Augustus |
mRNA |
9416 |
11553 |
. |
- |
. |
ID=Dca60230.1;Parent=Dca60230 |
| scaffold9123 |
Augustus |
exon |
9416 |
10083 |
. |
- |
. |
ID=Dca60230.1.exon1;Parent=Dca60230.1 |
| scaffold9123 |
Augustus |
exon |
10192 |
11360 |
. |
- |
. |
ID=Dca60230.1.exon2;Parent=Dca60230.1 |
| scaffold9123 |
Augustus |
exon |
11483 |
11553 |
. |
- |
. |
ID=Dca60230.1.exon3;Parent=Dca60230.1 |
