Carnation DB

Dca60238.1

Annotation

11-exons
f-1
sp|F6HVZ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0071g00780#GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P0C
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:18672828-18677365 FORWARD LENGTH=981
Repeat List (scaffold913)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60238.1	86	988	993	55.89	903	59	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HVZ2_VITVI	92	992	993	90.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60238.1	157	988	993	51.05	832	60	0
Target_name	Start	End	Length	Cov(%)
AT1G50410.1	154	980	981	84.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold913	Augus-PASA	mRNA	31357	41820	.	-	.	ID=Dca60238.1;Parent=Dca60238
scaffold913	Augus-PASA	exon	31357	31473	.	-	.	ID=Dca60238.1.exon1;Parent=Dca60238.1
scaffold913	Augus-PASA	exon	32680	32889	.	-	.	ID=Dca60238.1.exon2;Parent=Dca60238.1
scaffold913	Augus-PASA	exon	34026	34577	.	-	.	ID=Dca60238.1.exon3;Parent=Dca60238.1
scaffold913	Augustus	exon	36643	36864	.	-	.	ID=Dca60238.1.exon4;Parent=Dca60238.1
scaffold913	Augustus	exon	37380	37510	.	-	.	ID=Dca60238.1.exon5;Parent=Dca60238.1
scaffold913	Augustus	exon	38262	39261	.	-	.	ID=Dca60238.1.exon6;Parent=Dca60238.1
scaffold913	Augus-PASA	exon	39374	39448	.	-	.	ID=Dca60238.1.exon7;Parent=Dca60238.1
scaffold913	Augus-PASA	exon	39590	39661	.	-	.	ID=Dca60238.1.exon8;Parent=Dca60238.1
scaffold913	Augustus	exon	41016	41356	.	-	.	ID=Dca60238.1.exon9;Parent=Dca60238.1
scaffold913	Augustus	exon	41454	41558	.	-	.	ID=Dca60238.1.exon10;Parent=Dca60238.1
scaffold913	Augustus	exon	41664	41820	.	-	.	ID=Dca60238.1.exon11;Parent=Dca60238.1