Dca60386.1
Annotation
- 4-exons
- f-1
- sp|Q9SKE7_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13330#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- Repeat List (scaffold919)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60386.1 |
305 |
623 |
623 |
25.84 |
319 |
44 |
3e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SKE7_ARATH |
12 |
376 |
889 |
41.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60386.1 |
309 |
526 |
623 |
12.03 |
218 |
30 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
144 |
396 |
421 |
60.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold919 |
Augustus |
mRNA |
29663 |
34194 |
. |
+ |
. |
ID=Dca60386.1;Parent=Dca60386 |
| scaffold919 |
Augustus |
exon |
29663 |
30433 |
. |
+ |
. |
ID=Dca60386.1.exon1;Parent=Dca60386.1 |
| scaffold919 |
Augustus |
exon |
32828 |
33478 |
. |
+ |
. |
ID=Dca60386.1.exon2;Parent=Dca60386.1 |
| scaffold919 |
Augustus |
exon |
33583 |
33764 |
. |
+ |
. |
ID=Dca60386.1.exon3;Parent=Dca60386.1 |
| scaffold919 |
Augustus |
exon |
33927 |
34194 |
. |
+ |
. |
ID=Dca60386.1.exon4;Parent=Dca60386.1 |
