Carnation DB

Dca6039.1

Annotation

12-exons
f-1
sp|B9I3X7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834365#GO:0030170;GO:0016769#2F0P0C
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981889-7985037 FORWARD LENGTH=489
Repeat List (scaffold1235)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6039.1	1	489	489	86.09	489	87	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I3X7_POPTR	1	489	489	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6039.1	1	489	489	84.25	489	85	0
Target_name	Start	End	Length	Cov(%)
AT5G23670.1	1	489	489	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1235	Augustus	mRNA	32524	37617	.	+	.	ID=Dca6039.1;Parent=Dca6039
scaffold1235	Augustus	exon	32524	32649	.	+	.	ID=Dca6039.1.exon1;Parent=Dca6039.1
scaffold1235	Augustus	exon	32882	32947	.	+	.	ID=Dca6039.1.exon2;Parent=Dca6039.1
scaffold1235	Augustus	exon	33967	34055	.	+	.	ID=Dca6039.1.exon3;Parent=Dca6039.1
scaffold1235	Augustus	exon	34163	34308	.	+	.	ID=Dca6039.1.exon4;Parent=Dca6039.1
scaffold1235	Augustus	exon	34385	34509	.	+	.	ID=Dca6039.1.exon5;Parent=Dca6039.1
scaffold1235	Augustus	exon	34597	34690	.	+	.	ID=Dca6039.1.exon6;Parent=Dca6039.1
scaffold1235	Augustus	exon	35206	35369	.	+	.	ID=Dca6039.1.exon7;Parent=Dca6039.1
scaffold1235	Augustus	exon	35854	36015	.	+	.	ID=Dca6039.1.exon8;Parent=Dca6039.1
scaffold1235	Augustus	exon	36609	36735	.	+	.	ID=Dca6039.1.exon9;Parent=Dca6039.1
scaffold1235	Augustus	exon	36852	37018	.	+	.	ID=Dca6039.1.exon10;Parent=Dca6039.1
scaffold1235	Augustus	exon	37123	37230	.	+	.	ID=Dca6039.1.exon11;Parent=Dca6039.1
scaffold1235	Augustus	exon	37522	37617	.	+	.	ID=Dca6039.1.exon12;Parent=Dca6039.1