Carnation DB

Dca60484.1

Annotation

11-exons
f-1
sp|F6GV27_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g04460#GO:0016021;GO:0051205#0F1P1C
sp|B9GJQ3_POPTR#Inner membrane protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_706185#GO:0016021;GO:0051205#0F1P1C
Repeat List (scaffold9217)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60484.1	1	422	434	73.73	422	72	1e-167
Target_name	Start	End	Length	Cov(%)
sp\|F6GV27_VITVI	1	443	455	97.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60484.1	12	381	434	67.28	370	76	1e-157
Target_name	Start	End	Length	Cov(%)
AT2G28800.1	34	410	462	81.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9217	Augus-PASA	mRNA	1545	6391	.	+	.	ID=Dca60484.1;Parent=Dca60484
scaffold9217	Augus-PASA	exon	1545	1853	.	+	.	ID=Dca60484.1.exon1;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	2760	2870	.	+	.	ID=Dca60484.1.exon2;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	3334	3408	.	+	.	ID=Dca60484.1.exon3;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	3809	3869	.	+	.	ID=Dca60484.1.exon4;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	4141	4214	.	+	.	ID=Dca60484.1.exon5;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	4313	4417	.	+	.	ID=Dca60484.1.exon6;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	5180	5287	.	+	.	ID=Dca60484.1.exon7;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	5378	5478	.	+	.	ID=Dca60484.1.exon8;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	5835	5969	.	+	.	ID=Dca60484.1.exon9;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	6066	6189	.	+	.	ID=Dca60484.1.exon10;Parent=Dca60484.1
scaffold9217	Augus-PASA	exon	6290	6391	.	+	.	ID=Dca60484.1.exon11;Parent=Dca60484.1