Dca60496.1
Annotation
- 3-exons
- f-1
- sp|Q8H7J5_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OJA1325D05.1#unknown#0F0P0C
- Repeat List (scaffold9222)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60496.1 |
20 |
412 |
540 |
25.92 |
393 |
30 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8H7J5_ORYSJ |
28 |
490 |
1146 |
40.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60496.1 |
32 |
288 |
540 |
16.11 |
257 |
33 |
9e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
26 |
287 |
369 |
71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9222 |
Augustus |
mRNA |
6637 |
9319 |
. |
+ |
. |
ID=Dca60496.1;Parent=Dca60496 |
| scaffold9222 |
Augustus |
exon |
6637 |
7526 |
. |
+ |
. |
ID=Dca60496.1.exon1;Parent=Dca60496.1 |
| scaffold9222 |
Augustus |
exon |
7697 |
8096 |
. |
+ |
. |
ID=Dca60496.1.exon2;Parent=Dca60496.1 |
| scaffold9222 |
Augustus |
exon |
8987 |
9319 |
. |
+ |
. |
ID=Dca60496.1.exon3;Parent=Dca60496.1 |
