Dca60540.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold9247)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60540.1 |
1 |
696 |
720 |
46.38 |
696 |
47 |
2e-162
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
84 |
758 |
1717 |
39.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60540.1 |
418 |
540 |
720 |
5.69 |
123 |
33 |
6e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
66 |
189 |
192 |
64.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9247 |
Augustus |
mRNA |
993 |
3333 |
. |
- |
. |
ID=Dca60540.1;Parent=Dca60540 |
| scaffold9247 |
Augustus |
exon |
993 |
1213 |
. |
- |
. |
ID=Dca60540.1.exon1;Parent=Dca60540.1 |
| scaffold9247 |
Augustus |
exon |
1323 |
2024 |
. |
- |
. |
ID=Dca60540.1.exon2;Parent=Dca60540.1 |
| scaffold9247 |
Augustus |
exon |
2094 |
3333 |
. |
- |
. |
ID=Dca60540.1.exon3;Parent=Dca60540.1 |
