Carnation DB

Dca60563.1

Annotation

7-exons
f-2
sp|B9S511_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1719510#unknown#0F0P0C
AT5G48720.2 | Symbols: XRI, XRI1 | x-ray induced transcript 1 | chr5:19759233-19761621 FORWARD LENGTH=300
Repeat List (scaffold9259)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60563.1	10	263	263	41.82	254	39	1e-43
Target_name	Start	End	Length	Cov(%)
sp\|B9S511_RICCO	13	293	293	95.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60563.1	17	263	263	41.06	247	41	5e-35
Target_name	Start	End	Length	Cov(%)
AT5G48720.2	41	300	300	86.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9259	Augustus	mRNA	7341	8724	.	-	.	ID=Dca60563.1;Parent=Dca60563
scaffold9259	Augustus	exon	7341	7600	.	-	.	ID=Dca60563.1.exon1;Parent=Dca60563.1
scaffold9259	Augustus	exon	7681	7796	.	-	.	ID=Dca60563.1.exon2;Parent=Dca60563.1
scaffold9259	Augustus	exon	7876	7984	.	-	.	ID=Dca60563.1.exon3;Parent=Dca60563.1
scaffold9259	Augustus	exon	8071	8125	.	-	.	ID=Dca60563.1.exon4;Parent=Dca60563.1
scaffold9259	Augustus	exon	8288	8406	.	-	.	ID=Dca60563.1.exon5;Parent=Dca60563.1
scaffold9259	Augustus	exon	8502	8579	.	-	.	ID=Dca60563.1.exon6;Parent=Dca60563.1
scaffold9259	Augustus	exon	8669	8724	.	-	.	ID=Dca60563.1.exon7;Parent=Dca60563.1