Dca60842.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold9349)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60842.1 |
43 |
391 |
397 |
57.93 |
349 |
60 |
2e-133
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
507 |
893 |
896 |
43.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60842.1 |
43 |
382 |
397 |
30.22 |
340 |
32 |
5e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1018 |
1384 |
1401 |
26.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9349 |
Augustus |
mRNA |
268 |
2579 |
. |
+ |
. |
ID=Dca60842.1;Parent=Dca60842 |
| scaffold9349 |
Augustus |
exon |
268 |
394 |
. |
+ |
. |
ID=Dca60842.1.exon1;Parent=Dca60842.1 |
| scaffold9349 |
Augustus |
exon |
1398 |
1639 |
. |
+ |
. |
ID=Dca60842.1.exon2;Parent=Dca60842.1 |
| scaffold9349 |
Augustus |
exon |
1755 |
2579 |
. |
+ |
. |
ID=Dca60842.1.exon3;Parent=Dca60842.1 |
