Dca60892.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold9369)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60892.1 |
134 |
737 |
737 |
36.49 |
604 |
41 |
8e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
665 |
1501 |
43.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca60892.1 |
442 |
730 |
737 |
12.89 |
289 |
33 |
2e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
347 |
707 |
41.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold9369 |
Augustus |
mRNA |
6098 |
9717 |
. |
+ |
. |
ID=Dca60892.1;Parent=Dca60892 |
| scaffold9369 |
Augustus |
exon |
6098 |
6484 |
. |
+ |
. |
ID=Dca60892.1.exon1;Parent=Dca60892.1 |
| scaffold9369 |
Augustus |
exon |
7820 |
8259 |
. |
+ |
. |
ID=Dca60892.1.exon2;Parent=Dca60892.1 |
| scaffold9369 |
Augustus |
exon |
8331 |
9717 |
. |
+ |
. |
ID=Dca60892.1.exon3;Parent=Dca60892.1 |
