Carnation DB

Dca60929.1

Annotation

8-exons
f-1
sp|F6HDN8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g03190#GO:0016787#1F0P0C
AT2G32150.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:13659095-13660531 FORWARD LENGTH=263
Repeat List (scaffold938)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60929.1	1	266	266	68.04	266	68	1e-100
Target_name	Start	End	Length	Cov(%)
sp\|F6HDN8_VITVI	1	267	267	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca60929.1	13	266	266	60.9	254	63	3e-90
Target_name	Start	End	Length	Cov(%)
AT2G32150.1	4	263	263	98.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold938	Augus-PASA	mRNA	37555	44233	.	+	.	ID=Dca60929.1;Parent=Dca60929
scaffold938	Augus-PASA	exon	37555	37615	.	+	.	ID=Dca60929.1.exon1;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	37735	37800	.	+	.	ID=Dca60929.1.exon2;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	38093	38190	.	+	.	ID=Dca60929.1.exon3;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	39394	39431	.	+	.	ID=Dca60929.1.exon4;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	39581	39668	.	+	.	ID=Dca60929.1.exon5;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	39760	39969	.	+	.	ID=Dca60929.1.exon6;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	40155	40220	.	+	.	ID=Dca60929.1.exon7;Parent=Dca60929.1
scaffold938	Augus-PASA	exon	44060	44233	.	+	.	ID=Dca60929.1.exon8;Parent=Dca60929.1