Carnation DB

Dca6100.1

Annotation

8-exons
f-1
sp|D7TI61_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g07450#unknown#0F0P0C
Os03t0748000-01 YT521-B-like protein family protein.
Repeat List (scaffold1238)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6100.1	1	87	461	10.19	87	50	1e-10
Target_name	Start	End	Length	Cov(%)
sp\|D7TI61_VITVI	1	94	694	13.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca6100.1	128	406	461	38.17	279	63	1e-103
Target_name	Start	End	Length	Cov(%)
Os03t0748000-01	324	598	662	41.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1238	Augustus	mRNA	17626	20778	.	-	.	ID=Dca6100.1;Parent=Dca6100
scaffold1238	Augustus	exon	17626	17799	.	-	.	ID=Dca6100.1.exon1;Parent=Dca6100.1
scaffold1238	Augustus	exon	18461	18571	.	-	.	ID=Dca6100.1.exon2;Parent=Dca6100.1
scaffold1238	Augustus	exon	18706	18918	.	-	.	ID=Dca6100.1.exon3;Parent=Dca6100.1
scaffold1238	Augustus	exon	19016	19603	.	-	.	ID=Dca6100.1.exon4;Parent=Dca6100.1
scaffold1238	Augus-PASA	exon	19982	20049	.	-	.	ID=Dca6100.1.exon5;Parent=Dca6100.1
scaffold1238	Augus-PASA	exon	20150	20282	.	-	.	ID=Dca6100.1.exon6;Parent=Dca6100.1
scaffold1238	Augus-PASA	exon	20400	20470	.	-	.	ID=Dca6100.1.exon7;Parent=Dca6100.1
scaffold1238	Augustus	exon	20751	20778	.	-	.	ID=Dca6100.1.exon8;Parent=Dca6100.1