Carnation DB

Dca611.1

Annotation

5-exons
f-1
sp|B9IAY3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_899233#GO:0051539;GO:0003677;GO:0004519;GO:0006284#3F1P0C
AT4G12740.1 | Symbols: | HhH-GPD base excision DNA repair family protein | chr4:7494578-7497596 REVERSE LENGTH=630
Repeat List (scaffold1012)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca611.1	31	438	458	54.36	408	58	2e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9IAY3_POPTR	10	443	480	90.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca611.1	51	436	458	47.16	386	51	5e-108
Target_name	Start	End	Length	Cov(%)
AT4G12740.1	118	529	630	65.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1012	Augustus	mRNA	126377	129339	.	-	.	ID=Dca611.1;Parent=Dca611
scaffold1012	Augustus	exon	126377	126555	.	-	.	ID=Dca611.1.exon1;Parent=Dca611.1
scaffold1012	Augustus	exon	126658	127196	.	-	.	ID=Dca611.1.exon2;Parent=Dca611.1
scaffold1012	Augustus	exon	127590	127687	.	-	.	ID=Dca611.1.exon3;Parent=Dca611.1
scaffold1012	Augustus	exon	127780	127899	.	-	.	ID=Dca611.1.exon4;Parent=Dca611.1
scaffold1012	Augustus	exon	128899	129339	.	-	.	ID=Dca611.1.exon5;Parent=Dca611.1