Carnation DB

Dca61208.1

Annotation

6-exons
f-1
sp|B9N840_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_584573#unknown#0F0P0C
sp|B9RDM7_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1614490#unknown#0F0P0C
Repeat List (scaffold9481)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61208.1	108	413	558	33.51	306	61	5e-113
Target_name	Start	End	Length	Cov(%)
sp\|B9N840_POPTR	106	411	428	71.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca61208.1	108	428	558	31.18	321	55	4e-104
Target_name	Start	End	Length	Cov(%)
AT3G42630.1	94	414	415	77.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold9481	Augustus	mRNA	1166	6429	.	-	.	ID=Dca61208.1;Parent=Dca61208
scaffold9481	Augustus	exon	1166	1235	.	-	.	ID=Dca61208.1.exon1;Parent=Dca61208.1
scaffold9481	Augustus	exon	2362	2534	.	-	.	ID=Dca61208.1.exon2;Parent=Dca61208.1
scaffold9481	Augustus	exon	3287	3480	.	-	.	ID=Dca61208.1.exon3;Parent=Dca61208.1
scaffold9481	Augustus	exon	4212	5129	.	-	.	ID=Dca61208.1.exon4;Parent=Dca61208.1
scaffold9481	Augustus	exon	6027	6096	.	-	.	ID=Dca61208.1.exon5;Parent=Dca61208.1
scaffold9481	Augustus	exon	6178	6429	.	-	.	ID=Dca61208.1.exon6;Parent=Dca61208.1